Scientists Race to Preserve the Biodiversity Inside Our Bodies

The human microbiome has untold numbers of diverse bacteria within it. But around the world, many species are dying out.

By Jonathon Keats
Jun 12, 2019 5:00 AMDec 13, 2019 7:35 PM
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(Credit: Daria Kirpach)

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In the Amazon rainforest of Venezuela, Yanomami hunter-gatherers subsist on cassava, palm hearts and wild banana. They also hunt frogs, monkeys and tapirs, using techniques that probably would have been familiar to their ancestors 11,000 years ago. The extraordinary continuity of their culture, and the fact that some of the groups have had scant contact with outsiders, led biologists to wonder whether the Yanomami might reveal what the human digestive system looked like before industrialization supplied the world with processed foods and antibiotics.

In 2009, researchers had a chance to find out in a previously unknown Yanomami village. Health workers collected fecal and skin samples from about 30 villagers. When researchers cultured and analyzed microbes in the feces, the scientists discovered whole categories of bacteria that were absent from the guts of people from industrialized countries. Even more striking, they found the microbial population in the average Westerner to be about half as diverse as the community inside these hunter-gatherers.

Given the well-established importance of gut flora in digestion and metabolism, the researchers realized that this Yanomami microbial bounty might have implications beyond basic science. People’s personal microbial communities — or microbiomes — are believed to play a role in disorders ranging from obesity and diabetes to inflammatory bowel disease and Alzheimer’s, which shorten lives and overburden health care systems. (The global economic impact of obesity alone is $2 trillion annually.) These disorders don’t plague these preindustrial Amerindians, however. So researchers want to learn which microbes protect them and figure out how to reintroduce them in modern societies. It has the potential to affect health more profoundly than the discovery of the fabled Fountain of Youth.

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